PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG063950.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 856aa MW: 96642.7 Da PI: 8.9887

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG063950.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.4	7.3e-21	195	278	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 k+Y +YA +vGFsvrk k+ ++g +r +vCs+eg+r+++ k r+ +etrtgC a++ + ++ +gk++vt+++++HnH+la TRIDC2BG063950.2 195 KYYVSYAGNVGFSVRKGLWDKTAKSG-SRSRFYVCSREGFRAKNLPK-----RPCPETRTGCPARFSIMLTPSGKYRVTEFVQDHNHQLA 278 69******************8888.8999*******98877.....9*********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 856 aa Download sequence
LRSQTMATTS GGGAAGDPAA SSPAPSQPQH PTPRISHIVR TYLDLSSNSK KRRAARKNQL 60 KPGGVETSAA GENKGCGPSG AASLEHSRLL RELGIRVSRY TNEERRDIIT RYMQKRSGRQ 120 GVNRAAAKVP SRQALAERRR RSAGGQFLGK EDPQTADKPE EKAEEEPELP PEVVANAGGV 180 PIIGMVFESE EKACKYYVSY AGNVGFSVRK GLWDKTAKSG SRSRFYVCSR EGFRAKNLPK 240 RPCPETRTGC PARFSIMLTP SGKYRVTEFV QDHNHQLAGP IDIGMLKSQR LLSKVQSGNG 300 NAISIPSRYK NYLRTKSTKD MNAGDFGALT DYFRSMKSDN PSFYYAIQVD ENDKAANVFW 360 ADARSIFDYH YFSDVICFDM TYKLNDYSRP LALFLGMNHH RQMVIFGAAF LYDETAESFK 420 WLLETFKSAM CGKQPKTILT DRSAALKEAL DLAWPGTVHR YCLWQIYQDA AKSLAHVFCI 480 SEEFTHDFSH CVFDVEDGQE FVETWNVIME KYNLKENKLL NELYEGRENW ALPYGRQIFS 540 GDIKSMVRAE TLGIRMKEYL GCEKELSPFL KFFESSVEKR RQEEIQADYQ ASQREPRTPL 600 PLLWQAANLY TPINFELFRK EYEECMDCMV YGCGEFGSLS EYMITVKNRT KEQLVRFDSS 660 DGTVACTCKK FETAGILCCH ILKVYELKNV KEIPPQYLLK RWSKDAKLGT VHEIDGFSFD 720 SHIGSCVPER YAALCRLFYK IASKAAANVE TFSMVASQSD QLNEGIERTL QSTLAAKSSI 780 VHSIKDQLTR MAQNDYPLGN SSEAQKSTGK KMSEVTHRGN CQETNKRQKQ RRGVSAVYFF 840 IDGILAKQLQ DQGKGK

Sequence ? help Back to Top

Protein Sequence Length: 856 aa Download sequence

LRSQTMATTS GGGAAGDPAA SSPAPSQPQH PTPRISHIVR TYLDLSSNSK KRRAARKNQL  60
KPGGVETSAA GENKGCGPSG AASLEHSRLL RELGIRVSRY TNEERRDIIT RYMQKRSGRQ  120
GVNRAAAKVP SRQALAERRR RSAGGQFLGK EDPQTADKPE EKAEEEPELP PEVVANAGGV  180
PIIGMVFESE EKACKYYVSY AGNVGFSVRK GLWDKTAKSG SRSRFYVCSR EGFRAKNLPK  240
RPCPETRTGC PARFSIMLTP SGKYRVTEFV QDHNHQLAGP IDIGMLKSQR LLSKVQSGNG  300
NAISIPSRYK NYLRTKSTKD MNAGDFGALT DYFRSMKSDN PSFYYAIQVD ENDKAANVFW  360
ADARSIFDYH YFSDVICFDM TYKLNDYSRP LALFLGMNHH RQMVIFGAAF LYDETAESFK  420
WLLETFKSAM CGKQPKTILT DRSAALKEAL DLAWPGTVHR YCLWQIYQDA AKSLAHVFCI  480
SEEFTHDFSH CVFDVEDGQE FVETWNVIME KYNLKENKLL NELYEGRENW ALPYGRQIFS  540
GDIKSMVRAE TLGIRMKEYL GCEKELSPFL KFFESSVEKR RQEEIQADYQ ASQREPRTPL  600
PLLWQAANLY TPINFELFRK EYEECMDCMV YGCGEFGSLS EYMITVKNRT KEQLVRFDSS  660
DGTVACTCKK FETAGILCCH ILKVYELKNV KEIPPQYLLK RWSKDAKLGT VHEIDGFSFD  720
SHIGSCVPER YAALCRLFYK IASKAAANVE TFSMVASQSD QLNEGIERTL QSTLAAKSSI  780
VHSIKDQLTR MAQNDYPLGN SSEAQKSTGK KMSEVTHRGN CQETNKRQKQ RRGVSAVYFF  840
IDGILAKQLQ DQGKGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-105	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG063950.2