PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG063950.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 783aa MW: 88965.8 Da PI: 7.5762

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG063950.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.6	6.4e-21	70	153	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 k+Y +YA +vGFsvrk k+ ++g +r +vCs+eg+r+++ k r+ +etrtgC a++ + ++ +gk++vt+++++HnH+la TRIDC2BG063950.6 70 KYYVSYAGNVGFSVRKGLWDKTAKSG-SRSRFYVCSREGFRAKNLPK-----RPCPETRTGCPARFSIMLTPSGKYRVTEFVQDHNHQLA 153 69******************8888.8999*******98877.....9*********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 783 aa Download sequence
PLRVPSRQAL AERRRRSAGG QFLGKEDPQT ADKPEEKAEE EPELPPEVVA NAGGVPIIGM 60 VFESEEKACK YYVSYAGNVG FSVRKGLWDK TAKSGSRSRF YVCSREGFRA KNLPKRPCPE 120 TRTGCPARFS IMLTPSGKYR VTEFVQDHNH QLAGPIDIGM LKSQRLLSKV QSGNGNAISI 180 PSRYKNYLRT KSTKDMNAGD FGALTDYFRS MKSDNPSFYY AIQVDENDKA ANVFWADARS 240 IFDYHYFSDV ICFDMTYKLN DYSRPLALFL GMNHHRQMVI FGAAFLYDET AESFKWLLET 300 FKSAMCGKQP KTILTDRSAA LKEALDLAWP GTVHRYCLWQ IYQDAAKSLA HVFCISEEFT 360 HDFSHCVFDV EDGQEFVETW NVIMEKYNLK ENKLLNELYE GRENWALPYG RQIFSGDIKS 420 MVRAETLGIR MKEYLGCEKE LSPFLKFFES SVEKRRQEEI QADYQASQRE PRTPLPLLWQ 480 AANLYTPINF ELFRKEYEEC MDCMVYGCGE FGSLSEYMIT VKNRTKEQLV RFDSSDGTVA 540 CTCKKFETAG ILCCHILKVY ELKNVKEIPP QYLLKRWSKD AKLGTVHEID GFSFDSHIGS 600 CVPERYAALC RLFYKIASKA AANVETFSMV ASQSDQLNEG IERTLQSTLA AKSSIVHSIK 660 DQLTRMAQND YPLGNSSEAQ KSTGKKMSEV THRGNCQETN KRQKQRRGHS GEAAAGPRER 720 EVNVTDQFLP DQLMQGHYVL GHNFGISTSQ NIRDDLNQFG QASAVPILQQ QPFPGNGPLT 780 ETQ

Sequence ? help Back to Top

Protein Sequence Length: 783 aa Download sequence

PLRVPSRQAL AERRRRSAGG QFLGKEDPQT ADKPEEKAEE EPELPPEVVA NAGGVPIIGM  60
VFESEEKACK YYVSYAGNVG FSVRKGLWDK TAKSGSRSRF YVCSREGFRA KNLPKRPCPE  120
TRTGCPARFS IMLTPSGKYR VTEFVQDHNH QLAGPIDIGM LKSQRLLSKV QSGNGNAISI  180
PSRYKNYLRT KSTKDMNAGD FGALTDYFRS MKSDNPSFYY AIQVDENDKA ANVFWADARS  240
IFDYHYFSDV ICFDMTYKLN DYSRPLALFL GMNHHRQMVI FGAAFLYDET AESFKWLLET  300
FKSAMCGKQP KTILTDRSAA LKEALDLAWP GTVHRYCLWQ IYQDAAKSLA HVFCISEEFT  360
HDFSHCVFDV EDGQEFVETW NVIMEKYNLK ENKLLNELYE GRENWALPYG RQIFSGDIKS  420
MVRAETLGIR MKEYLGCEKE LSPFLKFFES SVEKRRQEEI QADYQASQRE PRTPLPLLWQ  480
AANLYTPINF ELFRKEYEEC MDCMVYGCGE FGSLSEYMIT VKNRTKEQLV RFDSSDGTVA  540
CTCKKFETAG ILCCHILKVY ELKNVKEIPP QYLLKRWSKD AKLGTVHEID GFSFDSHIGS  600
CVPERYAALC RLFYKIASKA AANVETFSMV ASQSDQLNEG IERTLQSTLA AKSSIVHSIK  660
DQLTRMAQND YPLGNSSEAQ KSTGKKMSEV THRGNCQETN KRQKQRRGHS GEAAAGPRER  720
EVNVTDQFLP DQLMQGHYVL GHNFGISTSQ NIRDDLNQFG QASAVPILQQ QPFPGNGPLT  780
ETQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-106	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG063950.6