PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG063950.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 723aa MW: 82419.5 Da PI: 7.0331

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG063950.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.8	5.8e-21	52	135	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 k+Y +YA +vGFsvrk k+ ++g +r +vCs+eg+r+++ k r+ +etrtgC a++ + ++ +gk++vt+++++HnH+la TRIDC2BG063950.9 52 KYYVSYAGNVGFSVRKGLWDKTAKSG-SRSRFYVCSREGFRAKNLPK-----RPCPETRTGCPARFSIMLTPSGKYRVTEFVQDHNHQLA 135 69******************8888.8999*******98877.....9*********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 723 aa Download sequence
GGQFLGKEDP QTADKPEEKA EEEPELPPEV VANAGGVPII GMVFESEEKA CKYYVSYAGN 60 VGFSVRKGLW DKTAKSGSRS RFYVCSREGF RAKNLPKRPC PETRTGCPAR FSIMLTPSGK 120 YRVTEFVQDH NHQLAGPIDI GMLKSQRLLS KVQSGNGNAI SIPSRYKNYL RTKSTKDMNA 180 GDFGALTDYF RSMKSDNPSF YYAIQVDEND KAANVFWADA RSIFDYHYFS DVICFDMTYK 240 LNDYSRPLAL FLGMNHHRQM VIFGAAFLYD ETAESFKWLL ETFKSAMCGK QPKTILTDRS 300 AALKEALDLA WPGTVHRYCL WQIYQDAAKS LAHVFCISEE FTHDFSHCVF DVEDGQEFVE 360 TWNVIMEKYN LKENKLLNEL YEGRENWALP YGRQIFSGDI KSMVRAETLG IRMKEYLGCE 420 KELSPFLKFF ESSVEKRRQE EIQADYQASQ REPRTPLPLL WQAANLYTPI NFELFRKEYE 480 ECMDCMVYGC GEFGSLSEYM ITVKNRTKEQ LVRFDSSDGT VACTCKKFET AGILCCHILK 540 VYELKNVKEI PPQYLLKRWS KDAKLGTVHE IDGFSFDSHI GSCVPERYAA LCRLFYKIAS 600 KAAANVETFS MVASQSDQLN EGIERTLQST LAAKSSIVHS IKDQLTRMAQ NDYPLGNSSE 660 AQKSTGKKMS EVTHRGNCQE TNKRQKQRRG HSGEAAAGPR EREVNVTDQF LPDQLMQYLT 720 EHS

Sequence ? help Back to Top

Protein Sequence Length: 723 aa Download sequence

GGQFLGKEDP QTADKPEEKA EEEPELPPEV VANAGGVPII GMVFESEEKA CKYYVSYAGN  60
VGFSVRKGLW DKTAKSGSRS RFYVCSREGF RAKNLPKRPC PETRTGCPAR FSIMLTPSGK  120
YRVTEFVQDH NHQLAGPIDI GMLKSQRLLS KVQSGNGNAI SIPSRYKNYL RTKSTKDMNA  180
GDFGALTDYF RSMKSDNPSF YYAIQVDEND KAANVFWADA RSIFDYHYFS DVICFDMTYK  240
LNDYSRPLAL FLGMNHHRQM VIFGAAFLYD ETAESFKWLL ETFKSAMCGK QPKTILTDRS  300
AALKEALDLA WPGTVHRYCL WQIYQDAAKS LAHVFCISEE FTHDFSHCVF DVEDGQEFVE  360
TWNVIMEKYN LKENKLLNEL YEGRENWALP YGRQIFSGDI KSMVRAETLG IRMKEYLGCE  420
KELSPFLKFF ESSVEKRRQE EIQADYQASQ REPRTPLPLL WQAANLYTPI NFELFRKEYE  480
ECMDCMVYGC GEFGSLSEYM ITVKNRTKEQ LVRFDSSDGT VACTCKKFET AGILCCHILK  540
VYELKNVKEI PPQYLLKRWS KDAKLGTVHE IDGFSFDSHI GSCVPERYAA LCRLFYKIAS  600
KAAANVETFS MVASQSDQLN EGIERTLQST LAAKSSIVHS IKDQLTRMAQ NDYPLGNSSE  660
AQKSTGKKMS EVTHRGNCQE TNKRQKQRRG HSGEAAAGPR EREVNVTDQF LPDQLMQYLT  720
EHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-107	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG063950.9