PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG064320.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 240aa    MW: 27914.1 Da    PI: 8.8605
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG064320.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF83.81.1e-26959151
                      S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      k+ien++ rqvtfskRr g+lKKA+EL +LCda+v vi+fs +gk+yeyss
  TRIDC2BG064320.1  9 KKIENTTSRQVTFSKRRMGLLKKANELAILCDAQVGVIVFSGSGKMYEYSS 59
                      68***********************************************96 PP
2K-box592e-20851621491
             K-box  14 aeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeen 91 
                       +++  +e++++k+e + L+   R+++GedL+sL+l++  +Leqq+e sl k+R +K++ll +q+ e++++e  ++e++
  TRIDC2BG064320.1  85 QQKIIHEMTRMKDESNRLKIIMRQYMGEDLGSLTLQDVSNLEQQIEFSLYKVRLRKQQLLDQQLLEMRQREMHMSEDQ 162
                       678889******************************************************************999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MGRGKVELKK IENTTSRQVT FSKRRMGLLK KANELAILCD AQVGVIVFSG SGKMYEYSSP  60
PWRIANIFDR YLKAPSTRFD EMDVQQKIIH EMTRMKDESN RLKIIMRQYM GEDLGSLTLQ  120
DVSNLEQQIE FSLYKVRLRK QQLLDQQLLE MRQREMHMSE DQSSSYMFHM NPARDQPGQS  180
ADVMNPKLFP LWDVGDQIYG QDAESSMTAL KLSPQLQEYK LQPVQPNLQE GNLHGYVLRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23260.38e-42MIKC_MADS family protein