PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG064320.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 253aa    MW: 29301.7 Da    PI: 8.0494
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG064320.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF83.71.2e-26959151
                      S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      k+ien++ rqvtfskRr g+lKKA+EL +LCda+v vi+fs +gk+yeyss
  TRIDC2BG064320.4  9 KKIENTTSRQVTFSKRRMGLLKKANELAILCDAQVGVIVFSGSGKMYEYSS 59
                      68***********************************************96 PP
2K-box56.31.4e-19851561485
             K-box  14 aeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkek 85 
                       +++  +e++++k+e + L+   R+++GedL+sL+l++  +Leqq+e sl k+R +K++ll +q+ e++++  
  TRIDC2BG064320.4  85 QQKIIHEMTRMKDESNRLKIIMRQYMGEDLGSLTLQDVSNLEQQIEFSLYKVRLRKQQLLDQQLLEMRQRVC 156
                       678889**************************************************************9975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MGRGKVELKK IENTTSRQVT FSKRRMGLLK KANELAILCD AQVGVIVFSG SGKMYEYSSP  60
PWRIANIFDR YLKAPSTRFD EMDVQQKIIH EMTRMKDESN RLKIIMRQYM GEDLGSLTLQ  120
DVSNLEQQIE FSLYKVRLRK QQLLDQQLLE MRQRVCETRC IDLSGIPEMH MSEDQSSSYM  180
FHMNPARDQP GQSADVMNPK LFPLWDVGDQ IYGQDAESSM TALKLSPQLQ EYKLQPVQPN  240
LQEGNLHGYV LRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23260.33e-41MIKC_MADS family protein