PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG064320.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 63aa    MW: 7092.33 Da    PI: 10.7484
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG064320.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF88.24.4e-28959151
                      S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      k+ien++ rqvtfskRr g+lKKA+EL +LCda+v vi+fs +gk+yeyss
  TRIDC2BG064320.8  9 KKIENTTSRQVTFSKRRMGLLKKANELAILCDAQVGVIVFSGSGKMYEYSS 59
                      78***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 63 aa     Download sequence    
MGRGKVELKK IENTTSRQVT FSKRRMGLLK KANELAILCD AQVGVIVFSG SGKMYEYSSP  60
PWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51870.28e-29MIKC_MADS family protein