PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG065430.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 250aa    MW: 25386.9 Da    PI: 10.0638
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG065430.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.91.4e-1952102155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       ++++GVr ++ +gr++AeIrdp     r +r++lg+f+tae Aa+a++aa++ ++g
  TRIDC2BG065430.1  52 PRFRGVRKRP-WGRYAAEIRDP---A-RkARVWLGTFDTAEAAARAYDAAALHYRG 102
                       689*******.**********8...2.35*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
APTSQTNQPT PHRATATTTA AHGRTLGAPL PMAPKNALPV AVAAAADGGM EPRFRGVRKR  60
PWGRYAAEIR DPARKARVWL GTFDTAEAAA RAYDAAALHY RGPKAKTNFP VGTVAAYTHI  120
PLPPPKALAV SPSSSTVESS SRDTPAAAPA APAVAAPAAP PALDLSLAMP AMVAAQPFLF  180
LDPRVAVTVA VAAPAPAPAP CRSAAISGMN KVASREEEQS DTGSSSSVVD ASPAVGVGFD  240
LNLPPPVEMA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28370.13e-22ERF family protein