PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG066730.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 218aa    MW: 25908.1 Da    PI: 8.8326
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG066730.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix40.38.5e-132473786
          trihelix 37 kmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
                      ++r+rg++r++ qCk+kw+nl +ryk  ++++ ++     ++cp+f++l+
  TRIDC2BG066730.1  2 ALRARGYRRTADQCKCKWKNLVNRYKGKETSDPEN----GRQCPFFEELH 47
                      5799***********************99999974....678******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
DALRARGYRR TADQCKCKWK NLVNRYKGKE TSDPENGRQC PFFEELHAVF TERARNMQRQ  60
LLQSESGTSV KKKLKRPSGD RSSGESDDNE YGVEVSDDEK PMISKKRKAS DKGQPSQRMA  120
ENSRTGSSSI HDLLQEFLVQ QQHVDMLWHE TMERRAQERL IFEQEWRQSM QKLEQERLML  180
EQSWIEREEQ RRMREEARAQ KRDSLMTTLL NKLLQEDL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
172108KKLKRPSGDRSSGESDDNEYGVEVSDDEKPMISKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38250.11e-23Trihelix family protein