PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG066760.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 221aa    MW: 25321.6 Da    PI: 8.6757
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG066760.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR170.73.5e-2243123190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       ++Yn+YA ++GFs+rks++k++ +n++i ++  vCs++g+re+e++k        a+trtgC+a+++ + +++g w v+k++++HnH la
  TRIDC2BG066760.2  43 DMYNTYAGKIGFSIRKSQTKRR-QNQTISQKYIVCSNQGERETESSK--------ATTRTGCQARVQFSVSREGIWTVQKVVTDHNHYLA 123
                       58***************98887.7777**************998877........9*******************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
LGSQDKMFLC NEQFEDDVVD KVGQALIVPE VGKSFDSEQQ AYDMYNTYAG KIGFSIRKSQ  60
TKRRQNQTIS QKYIVCSNQG ERETESSKAT TRTGCQARVQ FSVSREGIWT VQKVVTDHNH  120
YLASPNKLHK LRSQRRVVEA DRALIGQIRE AGMKPSQVYD FMVAFCGGVD KVPFSKMDCN  180
NEIGKERKKY LESNDAKTLL EYLKSKQRED PTFFYAIQVD E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.18e-35FAR1 family protein