PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG066890.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 243aa MW: 26696.8 Da PI: 9.6777

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG066890.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.5	1.3e-24	113	157	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++ +++k+CErH+hrgr+rsrk++e+ TRIDC2BG066890.3 113 DPEPGRCRRTDGKKWRCSKEAAQDSKYCERHMHRGRNRSRKPVET 157 79****************************************997 PP
2	QLQ	59.9	7.2e-21	52	87	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FTaaQ ++L++Q+l+yKyL+a++PvPp+Ll++i++ TRIDC2BG066890.3 52 TFTAAQYEELEQQALIYKYLVAGVPVPPDLLLPIRR 87 6*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MAMPFASLSP AADHHRSSPI FPFCRSSPLY SAHQQQQQHT MSGARWAARP ATFTAAQYEE 60 LEQQALIYKY LVAGVPVPPD LLLPIRRGFD SLASRFYHHH AFGYGSYFGK KLDPEPGRCR 120 RTDGKKWRCS KEAAQDSKYC ERHMHRGRNR SRKPVETQLV ATPHHSHSQQ LQQHAPAASA 180 AAFHSHSPYP AIATGGGGSF AVGSAQLHMD NAASPYATAG AAGNKDFSNN CHVPFVLSSS 240 QET

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	4e-48	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG066890.3