PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG067590.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LFY
Protein Properties Length: 199aa    MW: 21585.2 Da    PI: 9.5863
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG067590.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY254.64.2e-7827199154321
           FLO_LFY 154 vqeekeaagsggeglgeaelvaaeekkseeekkkaskkkqkrkkkkelkse.....ededeeeeededeegsgedgeerqrehPfivtepgev 241
                        ++e++ a+sgg g+ +a  ++a+ kk+++ +  +++kk++r+k kel+ +     +++    ++++ e+++g  g erqrehPf+vtepgev
  TRIDC2BG067590.3  27 LSNERDGAASGGIGEDDAMRMMASGKKQKNGSAARKAKKARRNKVKELRLDmqgdeHEDGGGGRSESTESSAGGVGGERQREHPFVVTEPGEV 119
                       33466678888887666666655555544444444455777777777766644332222233455666677888899**************** PP

           FLO_LFY 242 argkknGLDYLfdLyeqCrefLlqvqkiakerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasna 321
                       ar+kknGLDYLf+LyeqCr fLlqvq++ak +G+k+Ptkvtnqvfrya k+gasyinkPkmrhYvhCYalhcLde+as+a
  TRIDC2BG067590.3 120 ARAKKNGLDYLFHLYEQCRLFLLQVQSMAKLHGQKSPTKVTNQVFRYASKVGASYINKPKMRHYVHCYALHCLDEDASDA 199
                       ******************************************************************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
AASCHQAAAT TDTSPAAPST APHRKVLSNE RDGAASGGIG EDDAMRMMAS GKKQKNGSAA  60
RKAKKARRNK VKELRLDMQG DEHEDGGGGR SESTESSAGG VGGERQREHP FVVTEPGEVA  120
RAKKNGLDYL FHLYEQCRLF LLQVQSMAKL HGQKSPTKVT NQVFRYASKV GASYINKPKM  180
RHYVHCYALH CLDEDASDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.13e-58LFY family protein