PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG067940.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 309aa    MW: 33643.8 Da    PI: 4.8389
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG067940.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.31.3e-161663148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg+WT+eEd +l+ +++++G  +W++ ++  g+ R++k+c++rw +yl
  TRIDC2BG067940.2 16 RGSWTPEEDMRLIAYIQKFGHANWRALPKQAGLLRCGKSCRLRWINYL 63
                      89******************************99************97 PP
2Myb_DNA-binding56.46.9e-1869114148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       rg++T eE+e l++++++lG++ W++Ia++++ gRt++++k+ w+++l
  TRIDC2BG067940.2  69 RGNFTVEEEETLIKLHNMLGNK-WSKIAACLP-GRTDNEIKNVWNTHL 114
                       89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MGKGRAPCCA KVGLNRGSWT PEEDMRLIAY IQKFGHANWR ALPKQAGLLR CGKSCRLRWI  60
NYLRPDLKRG NFTVEEEETL IKLHNMLGNK WSKIAACLPG RTDNEIKNVW NTHLKKRVAA  120
SAGEHKKGGA KGKKKTTCVD VPAPAPSPSP SSSTTTTTTT TTNCSSGESG EQSNSSKELE  180
FELDKIEIPM LDLGFDLDML LDTGALLDLP EIDIVPELWS IMDGEGGAGA CAETAQDNAA  240
PCHGKGTEAR AATADDDDGK EWWLEDLEKE LGLWGPIEDY QHQQPDPQGC VDPLSASVDD  300
PVSCYFQAG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79180.17e-70MYB family protein