PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG068120.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 323aa MW: 35485.9 Da PI: 5.9139

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG068120.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.3	6.2e-17	15	64	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ lv+ +k++Gg+ +W+ ++ g++R++k+c++rw +yl TRIDC2BG068120.1 15 KGPWTEEEDKTLVEHIKKHGGKvgSWRGLPKSAGLNRCGKSCRLRWTNYL 64 79**********************************************97 PP
2	Myb_DNA-binding	52.1	1.5e-16	70	114	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T eE+ l++ +++ lG++ W+tIa ++ gRt++++k++w+++ TRIDC2BG068120.1 70 RGNFTDEEERLIITLHAGLGNK-WSTIATHLE-GRTDNEIKNYWNTH 114 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MGRSPCCCRD ADVKKGPWTE EEDKTLVEHI KKHGGKVGSW RGLPKSAGLN RCGKSCRLRW 60 TNYLRPDIKR GNFTDEEERL IITLHAGLGN KWSTIATHLE GRTDNEIKNY WNTHIRKKLL 120 RMGVDPVTHQ QLPPDQSHRH LNATSIAHLP EALLWAAAAA SLSSLDTGAL MQAQLLQQLI 180 PAIGSNYGTS GLIANLAAAN AMQNSSGSMV PDLLLEDQMN CLQPGYLCNT SNFAEQHVVQ 240 EQLTNDTSPG TSSFAAAEQA DELCNTAASF ASHHVAPVGD SAGDWSPSQE FAGLLEPMME 300 LPDLRSLESD SFWKEILEDS YRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02940.1	3e-70	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG068120.1