PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG068290.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 315aa MW: 34174 Da PI: 9.4003

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG068290.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.5	5.6e-14	85	136	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ ++ + + a+i+ A++++k+L+ TRIDC2BG068290.4 85 QRMTHIAVERNRRRQMNEYLAALRSLMPES---YAHRGDQASIVGGAIDFVKELE 136 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
MTLDALCAVS DVLVYDTFNA AAAASAAPAD SSLLFGDEAW MAGSASAAAP AVTAVPVEEG 60 EKAQGRRKRR RRARSCKNRE DAESQRMTHI AVERNRRRQM NEYLAALRSL MPESYAHRGD 120 QASIVGGAID FVKELEQLLQ SLEAQKRTLL AQPEQEHKPL PIRDAMPSSS TTVAAAAAAT 180 TTSTDEGKQA AATHDTTGPP FAGFFTYPQY VRLLPPRDDA DDRAGAADIE VTLVETHASV 240 RVMAPRRPGQ LLRMVAGMEA LRLTVLHLNV TTLGSLALYS LSVKRRKMTT TLAIKPVRTM 300 LEGPKTCWVL AQHPK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	66	72	RRKRRRR
2	67	71	RKRRR
3	67	74	RKRRRRAR
4	86	97	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	5e-49	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG068290.4