PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG068370.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 182aa MW: 19542 Da PI: 7.1959

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG068370.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.4	0.00011	66	88	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C C + F++ L H+++H TRIDC2BG068370.1 66 YTCAFCRREFRSAQALGGHMNVH 88 9********************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 182 aa Download sequence
MAPASSTEPT KHITLHNFLK QQQLLQHRLK PTAVLWGWPA TPRPAPDDAS DDADGMGGGA 60 WPPRSYTCAF CRREFRSAQA LGGHMNVHRR DRAKLRGQFG AAAAQLGAAS AAEAPATAAA 120 TTEYALLYPV LNSTATGARA VFIPSGDMLL STPLAMAHGH RCQQSDDEND TDIDLELRLG 180 WP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23130.1	9e-17	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG068370.1