PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG070310.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 139aa    MW: 16302.4 Da    PI: 7.8497
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG070310.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B393.81.2e-2936128187
                       EEEE-..-HHHHTT-EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                       f+k ltpsdv+k++rlv+pk++ae++             ++  l++ede g+ W+++++y+ +s++yvltkGW+++vk+++L++gD+v F+++
  TRIDC2BG070310.1  36 FEKSLTPSDVGKLNRLVIPKQHAERYfplngedsP--GDKDLLLSFEDEAGKPWRFRYSYWTSSQSYVLTKGWSRYVKEKQLDAGDIVHFERV 126
                       99***************************977442..33666899**********************************************77 PP

                       SS CS
                B3  86 gr 87 
                       + 
  TRIDC2BG070310.1 127 RG 128
                       54 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
MAMHPLAQGH PQAWPWGVAM YTNIHYHHQY EREHLFEKSL TPSDVGKLNR LVIPKQHAER  60
YFPLNGEDSP GDKDLLLSFE DEAGKPWRFR YSYWTSSQSY VLTKGWSRYV KEKQLDAGDI  120
VHFERVRGLG TGDRLFIHC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11580.21e-49B3 family protein