PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG070910.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 220aa    MW: 23289.4 Da    PI: 10.5841
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG070910.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.31.4e-1669119255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       ++ GVr ++ +g+++AeIrd + ng  +r++lg+fg++e Aa a+++a+ + +g
  TRIDC2BG070910.1  69 DFIGVRTRP-WGKFAAEIRDSTRNG--ARVWLGTFGSPEAAAMAYDQAAFSARG 119
                       688***999.**********44465..**********************99886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MSDMDDMTFL GTLLESTGHA SCSGPSLSSS SSCSDMTGMG PGAPHVPAGS SSPKRRGHQA  60
TAAVPIAKDF IGVRTRPWGK FAAEIRDSTR NGARVWLGTF GSPEAAAMAY DQAAFSARGD  120
AAVLNFPVER VRESLRALAL GAVVGSPVLA LKRRHRTRRR SPNKRPVKQQ RRVAAVQEAA  180
LSATTGAVVL EDLGVEYLEE LLRVSEPHMG HLHTTATASS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.17e-40ERF family protein