PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG071610.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TALE

Protein Properties

Length: 258aa MW: 28946.4 Da PI: 7.5063

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG071610.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.7	8.4e-08	207	240	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + TRIDC2BG071610.1 207 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 240 569*****************************87 PP
2	ELK	29.7	1.5e-10	161	182	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++L+++++E++ TRIDC2BG071610.1 161 ELKHELKQGYREKLVDIREEIL 182 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence
SFQGGEERPD LDPRRVVPAG CCCWRRTSPA SASPPPSTSS PASTRRSPRV PPAAAPAGGE 60 ELDLFMTHYV LLLCSFKEQL QQHVRVHAME AVMACWELEQ TLQSLTGASP GEGTGATMSD 120 DEDNPVDSES NMFDGNDVSD GMGFGMLTEG DRSLVERVRQ ELKHELKQGY REKLVDIREE 180 ILRKRRAGKL PGDTASTLKA WWQAHAKWPY PTEEDKARLV QETGLQLKQI NNWFINQRKR 240 NWHSNPTSSS SDKSKRKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	238	258	RKRNWHSNPTSSSSDKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.2	1e-115	TALE family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG071610.1