PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG071930.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 211aa    MW: 22947.9 Da    PI: 8.3506
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG071930.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.43e-141764355
                      HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                      r+h+e+Er+RR+riN  +++Lr+l+P+a      +++Ka+ L ++v+++++Lq
  TRIDC2BG071930.1 17 RSHSEAERKRRQRINAHLATLRTLVPSA-----SRMDKAALLGEVVRHVRELQ 64
                      58*************************9.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MATDGECSTP GKGATVRSHS EAERKRRQRI NAHLATLRTL VPSASRMDKA ALLGEVVRHV  60
RELQGRANDA TEGVVDVVPG ETDEVGVEED DYLLNAGPTD DEPRWRRRVR AWVCCADRPG  120
LMSDLGRAVR SVGSARPVRA EIATVGGRTR SVLELEHVCH EAGPANDRAV ALSTLRAALR  180
TVLFNREELL ATAAAVDGYK RPRLSPVQQL S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12328ERKRRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38070.14e-18bHLH family protein