PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG072200.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 225aa    MW: 25953.9 Da    PI: 9.8329
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG072200.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.62.5e-14111204297
                       EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       +k++++ dv  s  +++p  f+e++  + +es+++tl d++ + W+v + y  +   r  +++GW   + +n L+e+D +vF+l + ++ + +
  TRIDC2BG072200.5 111 IKEMKHTDVYVSYFMIIPDMFVEKFL-P-KESRKMTLWDPQAKPWKVWYEYtVGECPRAAFSAGWGALAMENYLEERDLCVFELLD-DDYNIK 200
                       58899999999999********9995.3.36789***************995444445999**********************887.455556 PP

                       EEEE CS
                B3  94 vkvf 97 
                       ++v+
  TRIDC2BG072200.5 201 LHVY 204
                       6655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
SRAEGKGSAA SSASKGMASS HSLAVHTGVF VPESVCKDLT KLHKSFGKKH SMKAQFPMFN  60
KSNSENQPGR VIVKVQRRPE LKSQRRPITQ RDEEYAMERT QRFQSKRPFV IKEMKHTDVY  120
VSYFMIIPDM FVEKFLPKES RKMTLWDPQA KPWKVWYEYT VGECPRAAFS AGWGALAMEN  180
YLEERDLCVF ELLDDDYNIK LHVYRAVLDI SPFALAPKYR QQGCA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-12B3 family protein