PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG078210.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 245aa    MW: 26115.3 Da    PI: 10.0928
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG078210.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.37.1e-1771120255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr +k +g+WvAeIr+p +   r+r++lg++ t+  Aa+a++ a  +l+g
  TRIDC2BG078210.2  71 QYRGVRMRK-WGKWVAEIREPHK---RTRIWLGSYATPVAAARAYDTAVFYLRG 120
                       7******99.**********732...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MQQGEYRSSS SSEGSAGSAA AAAAAAAAMA PLAAAAAAVV AKEEHNVTVA VAPPIPMAMA  60
MPLQQQQPRK QYRGVRMRKW GKWVAEIREP HKRTRIWLGS YATPVAAARA YDTAVFYLRG  120
RSARLNFPDE ISALALSSPE AAEAGAAGGE MAGELGDGGA LSAASIRKKA IEVGSRVDAL  180
QTGMTTMVAA PTHQRERQRL HHHHHAEPHG EELHRHVKQQ RTAWNGRAKN PDLNQAPSPD  240
TSDAE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23340.13e-40ERF family protein