PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG078210.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 172aa    MW: 18828.5 Da    PI: 12.122
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG078210.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.13.7e-174392255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      +y+GVr +k +g+WvAeIr+p +   r+r++lg++ t+  Aa+a++ a  +l+g
  TRIDC2BG078210.3 43 QYRGVRMRK-WGKWVAEIREPHK---RTRIWLGSYATPVAAARAYDTAVFYLRG 92
                      7******99.**********732...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MAPLAAAAAA VVAKEEHNVT VAVAPPIPMA MAMPLQQQQP RKQYRGVRMR KWGKWVAEIR  60
EPHKRTRIWL GSYATPVAAA RAYDTAVFYL RGRSARLNFP DEISGDGGRA GRRRRAVGRV  120
DPEEGHRGRV PRGRAPDRHD HDGRRAHAPT GAAEAPPPPP RGAARRGAAP PR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G06746.12e-34ERF family protein