PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG078210.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 188aa    MW: 20042.7 Da    PI: 10.6741
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG078210.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.94.4e-174291255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      +y+GVr +k +g+WvAeIr+p +   r+r++lg++ t+  Aa+a++ a  +l+g
  TRIDC2BG078210.4 42 QYRGVRMRK-WGKWVAEIREPHK---RTRIWLGSYATPVAAARAYDTAVFYLRG 91
                      7******99.**********732...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
HAAGRVPLVV FQRGLRGVGG CCCGCGGGHG AFGGRGRGGG KQYRGVRMRK WGKWVAEIRE  60
PHKRTRIWLG SYATPVAAAR AYDTAVFYLR GRSARLNFPD EISALALSSP EAAEAGAAGG  120
EMAGELGDGG ALSAASIRKK AIEVGSRVDA LQTGMTTMVA APTHQRERQR LHHHHHAEPH  180
GEELHRHV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13340GGRGRGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23340.11e-34ERF family protein