PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG078260.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 252aa MW: 27436.4 Da PI: 6.3082

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG078260.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	24.7	5.8e-08	1	34	17	55
AP2 17 AeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 A++rd + k+++lg f+ta Aa+a+++a+ k++g TRIDC2BG078260.5 1 AQCRD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 34 89999......55************************998 PP
2	AP2	44.4	4.1e-14	76	126	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+eeAa+ +++a+ k +g TRIDC2BG078260.5 76 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEEEAARSYDRAAIKCNG 126 89******.7**5553..2.26********************99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence
AQCRDCGKQV YLGGFDTAHA AARAYDRAAI KFRGMEADIN FSLEDYDDIK QMGNLTKEEF 60 VHVLRRQSTG FPRGSSKYRG VTLHKCGRWE ARMGQFLGKK YVYLGLFDTE EEAARSYDRA 120 AIKCNGKDAV TNFDPSTYAE EFEPTASAGD AEQNLDLSLG SSAGSNKRGS LDGGDDDGAA 180 GPDQRVPMAF ELDWQTAAAR STKAKFDQSL THHQMPPPLL QASHMPFSPR HHQFMGNGDP 240 GTAGGPSLTV GA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	3e-84	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG078260.5