PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG078260.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 218aa    MW: 23766.2 Da    PI: 5.3153
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG078260.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP244.83.2e-144292155
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      s+y+GV+ +k  grW+A+   +     +k+++lg f+t+eeAa+ +++a+ k +g
  TRIDC2BG078260.8 42 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEEEAARSYDRAAIKCNG 92
                      89********.7******5553..2.26**********************99776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MEADINFSLE DYDDIKQMGN LTKEEFVHVL RRQSTGFPRG SSKYRGVTLH KCGRWEARMG  60
QFLGKKYVYL GLFDTEEEAA RSYDRAAIKC NGKDAVTNFD PSTYAEEFEP TASAGDAEQN  120
LDLSLGSSAG SNKRGSLDGG DDDGAAGPDQ RVPMAFELDW QTAAARSTKA KFDQSLTHHQ  180
MPPPLLQASH MPFSPRHHQF MGNGDPGTAG GPSLTVGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36920.12e-71AP2 family protein