PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG078260.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 115aa    MW: 13352.3 Da    PI: 9.7391
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG078260.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.82e-1176115144
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAak 44 
                       s+y+GV+ +k  grW+A+   +     +k+++lg f+t+eeAa+
  TRIDC2BG078260.9  76 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEEEAAR 115
                       89********.7******5553..2.26**************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 115 aa     Download sequence    
FDTLVPIKLC SFLISLSFVR GRRAYDRAAI KFRGMEADIN FSLEDYDDIK QMGNLTKEEF  60
VHVLRRQSTG FPRGSSKYRG VTLHKCGRWE ARMGQFLGKK YVYLGLFDTE EEAAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36920.12e-54AP2 family protein