PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG078290.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WOX
Protein Properties Length: 157aa    MW: 17214.8 Da    PI: 11.0614
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG078290.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.41.6e-2070129357
                       --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                       +R+++++eq+++Le+l++   r+p+ +++e+++++l    +++ ++V++WFqN++a+e++
  TRIDC2BG078290.2  70 TRWNPSAEQIKVLEALYRGgMRTPNSAQIERITEELgrhgRIEGKNVFYWFQNHKARERQ 129
                       8*****************99**************************************97 PP
2Wus_type_Homeobox1161.8e-3769131365
  Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        +tRW+P++eQik+Le+ly+ G+rtPn+++i+rit+eL ++G+ie+kNVfyWFQN+kaRerqkq
   TRIDC2BG078290.2  69 TTRWNPSAEQIKVLEALYRGGMRTPNSAQIERITEELGRHGRIEGKNVFYWFQNHKARERQKQ 131
                        69***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
SPSPATAPST SPPSALFPYG AFQCLRPLAP KISLPDQPRK LVAPPDVLGR VRNATKLLSC  60
TVQVPVGGTT RWNPSAEQIK VLEALYRGGM RTPNSAQIER ITEELGRHGR IEGKNVFYWF  120
QNHKARERQK QKRAALLTLS TLDSSSPPAT ATTKLRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46480.11e-33WOX family protein