PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG078430.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 203aa    MW: 22219.3 Da    PI: 6.5046
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG078430.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.13.7e-1454106155
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       ++ +hn+ Er RR+++N+ +  Lr+llP a   + kKls  +++ +A +YI +Lq
  TRIDC2BG078430.1  54 KKLSHNAYERDRRKQLNELYLSLRSLLPDA--DHTKKLSIPTTVCRALKYIPELQ 106
                       6789*************************7..35666***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
AQIFSGQLPP WQNIDVDLDL DLDVLEDDII RELSGRPANP ASSGSGSGGP GSHKKLSHNA  60
YERDRRKQLN ELYLSLRSLL PDADHTKKLS IPTTVCRALK YIPELQKQVE NLEKKKEKLA  120
SANCKPGVLS ASCSIAPTVS ATCLNDKEIM VQISLLRDTD ASTALPLSKC INVLENEGLE  180
LVSSSTSCTF GNKMFYNLHL QVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.13e-29bHLH family protein