PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG079500.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 96aa    MW: 10392.7 Da    PI: 8.5443
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG079500.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.32.4e-0723631554
                      HHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
               HLH 15 riNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                      +i + +++L+ llP+ + ++++ + s a +L+++++YI+sL
  TRIDC2BG079500.1 23 QISELLSKLQALLPEsQARNGAHRGSAARVLQETCNYIRSL 63
                      7999***********666888888***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    
MSSSSRRSRT RHAGSSTSIS EEQISELLSK LQALLPESQA RNGAHRGSAA RVLQETCNYI  60
RSLHREVDNL SETLAALLAS DAVTAEQAAV IRSLLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28857.19e-21bHLH family protein