PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG079930.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 403aa    MW: 44309.3 Da    PI: 7.6227
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG079930.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF57.22.2e-182773349
                      --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
            SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                      ie++ +r+vtfskRr+g++K A+ LS L++a+vav++ s++gk++ +
  TRIDC2BG079930.2 27 IEDDKQRSVTFSKRRAGLFKGASNLSALTGAKVAVVLESESGKMHAF 73
                      9********************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    
LPSVVISPPV VHLSMPRREV RLGVCHIEDD KQRSVTFSKR RAGLFKGASN LSALTGAKVA  60
VVLESESGKM HAFGTPSVKP IIDAFLSRDP LMEPLADNAG KARVASLQSK VARLDMENAM  120
LEKRANLSLQ HIKKIQAENP GMAANNIFSK EKDLCLEDLN RLFNDLLRVN EHIRHRMPPL  180
HHGHAPRIGG PNVQQNQLLP RGPSQDHSKT HRASLQSTSS HHIPPQVLPP VPLPPTPQHT  240
MEPSLHMQVP QMFPSPPSSL ALQLRSLMKP IPHQVPQMFQ STPPPSNPHL ASLLQPDLDQ  300
VHGLPPRPQP QLEEYANPYK TIEPSQNKTI PNSGGNDIGV RESLGHDNSP YAPLDQAHHN  360
EILGMYSYMG YNGSDVGQYN LRCDEWVNAP PESSGGNDGD TDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.15e-14M-type_MADS family protein