PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG082200.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 331aa    MW: 35616.2 Da    PI: 8.6797
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG082200.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.62.9e-052162531254
                       HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       R +++ +++  L++l+ +      +K + a++L +++eYIk L
  TRIDC2BG082200.2 216 RKEKLGDRITALQQLVSPF-----GKTDTASVLHETIEYIKFL 253
                       677888999*******998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MMIIDPHTSS GAGNMHGFLQ VGHHDMSSRT DQQSMMNAVA APNNLDLALQ GHHHHQQQQD  60
DHHRQQQLLS SLGAPELLLS PNSPYGFQSS LLRSLIEPTG KPAPAAGLLQ QYQYQQMGGQ  120
TGARGEPLQF TNDAAFWNQS AGFGMGMAAP PATDNTSMRA AKQPSPAPRG ANLALKTVLE  180
GVGDSSSIVA KKAGGEPAFK KPRMETPSPL PTFKVRKEKL GDRITALQQL VSPFGKTDTA  240
SVLHETIEYI KFLHDQVGVL SAPYLKSGHH QHQVPQYLKS SSNGSPDKSC KDGGEVSLKG  300
RGLCLVPISS TFAVASDVPV DFWNPFGPQF R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.32e-46bHLH family protein