PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG082780.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 170aa    MW: 17434.6 Da    PI: 10.2412
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG082780.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.44.1e-191262155
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      ++y+GVr ++ +gr++AeIrdp +   r+r++lg++++ae Aa+a++ a++ l+g
  TRIDC2BG082780.1 12 PRYRGVRKRP-WGRFAAEIRDPAK---RARVWLGTYDSAEAAARAYDVAARTLRG 62
                      68********.**********843...6*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
DAAAAVGLAV APRYRGVRKR PWGRFAAEIR DPAKRARVWL GTYDSAEAAA RAYDVAARTL  60
RGPLATTNFP QDLVSFPALP ALPRPSRPAS PGPACSASST VESYSGPRAA NGPRAVPRAP  120
APAAPLAKRP GGDAGCQSDC ASSASVVDDA GDEAASAAVR PRAPFVFDLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20310.18e-22ERF family protein