PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG084520.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 212aa MW: 23513 Da PI: 9.6904

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG084520.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.3	7.2e-18	80	127	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+l+ ++++G g+W++ +++ g+ R++k+c++rw +yl TRIDC2BG084520.8 80 KGPWTPEEDEKLLAHIEEHGHGSWRALPSKAGLQRCGKSCRLRWTNYL 127 79********************************************97 PP
2	Myb_DNA-binding	51	3.3e-16	133	178	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia ++ +Rt++++k++w+++l TRIDC2BG084520.8 133 RGKFSLQEEQTIIQLHALLGNR-WSAIATHLS-RRTDNEIKNYWNTHL 178 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MLHSYFDGVM DVLSSFAVRL NNASCHEIVP VSFFPPSLCS TSVELLCTQL SAPGFRKAAA 60 YYGPTPMGRS LCCDKVGLKK GPWTPEEDEK LLAHIEEHGH GSWRALPSKA GLQRCGKSCR 120 LRWTNYLRPD IKRGKFSLQE EQTIIQLHAL LGNRWSAIAT HLSRRTDNEI KNYWNTHLKK 180 RLAKMGIDPV THKAASGAPV GTADDVRSAK AA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	1e-87	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG084520.8