PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG085500.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 335aa    MW: 38169.1 Da    PI: 9.7851
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG085500.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.37.6e-15201295394
                       EE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS
                B3   3 kvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.se 89 
                       k+lt+sdv++ gr+vlpk+ ae++   + ++ +  l++ed +   +W++k++y  ++ks++yvl+  + eF k ++L++ D+++++  ++ ++
  TRIDC2BG085500.1 201 KELTNSDVGNIGRIVLPKRDAEANlpALLERDGLILKMEDmRLPVTWNFKFRYwpNNKSRMYVLE-STGEFSKNHNLETQDTFIIY--KSlES 290
                       899***********************777778888999995555*********89999999**99.9******************9..55577 PP

                       E..EE CS
                B3  90 felvv 94 
                       +++ v
  TRIDC2BG085500.1 291 GKFIV 295
                       75555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
WQPPAPQMGV AAAPRQAPMG AGVFGDWTMY NVNSTFVSVA CGSSSSVRGN NNGYHQSSRL  60
CSPTAWPNNF MPPPRSPYSV YPHGIQQQQG HQQAITYNAN NNHQQGFVSN FRVDPPLLPA  120
QCFQPISPAS NNRSPPQYLD EARYAKRAKR RTQKRKNSED PPEMGSENAM MLDENHNFSN  180
QAQQIFTTRF NCKDYHMIVW KELTNSDVGN IGRIVLPKRD AEANLPALLE RDGLILKMED  240
MRLPVTWNFK FRYWPNNKSR MYVLESTGEF SKNHNLETQD TFIIYKSLES GKFIVRGEKV  300
TGQCATLICP ECKEAGRIYN KQCGFTRNLH AKRRR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1150156RRTQKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24650.12e-33B3 family protein