PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG085500.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 338aa    MW: 38427.3 Da    PI: 9.7851
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG085500.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.37.7e-15204298394
                       EE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS
                B3   3 kvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.se 89 
                       k+lt+sdv++ gr+vlpk+ ae++   + ++ +  l++ed +   +W++k++y  ++ks++yvl+  + eF k ++L++ D+++++  ++ ++
  TRIDC2BG085500.2 204 KELTNSDVGNIGRIVLPKRDAEANlpALLERDGLILKMEDmRLPVTWNFKFRYwpNNKSRMYVLE-STGEFSKNHNLETQDTFIIY--KSlES 293
                       899***********************777778888999995555*********89999999**99.9******************9..55577 PP

                       E..EE CS
                B3  90 felvv 94 
                       +++ v
  TRIDC2BG085500.2 294 GKFIV 298
                       75555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
WQPPAPQMGV AAAPRQAPMG AGVFGDWTMY NVNSTFVSVA CGSSSSVRGN NNGYHQSSRL  60
CSPTAWPNNF MPPPRSPYSV YPHGIQQQQG HQQAITYNAN NNHQQGNSGF VSNFRVDPPL  120
LPAQCFQPIS PASNNRSPPQ YLDEARYAKR AKRRTQKRKN SEDPPEMGSE NAMMLDENHN  180
FSNQAQQIFT TRFNCKDYHM IVWKELTNSD VGNIGRIVLP KRDAEANLPA LLERDGLILK  240
MEDMRLPVTW NFKFRYWPNN KSRMYVLEST GEFSKNHNLE TQDTFIIYKS LESGKFIVRG  300
EKVTGQCATL ICPECKEAGR IYNKQCGFTR NLHAKRRR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1153159RRTQKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24650.13e-33B3 family protein