PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG085510.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 202aa    MW: 21106.9 Da    PI: 11.2711
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG085510.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.71.2e-123881447
                      S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      WT++E+ l++ + +++G+g+W++I+r +   Rt+ q+ s+ qky
  TRIDC2BG085510.2 38 WTEDEHRLFLLGLEKYGKGDWRSISRNFVISRTPTQVASHAQKY 81
                      *****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
GGSGGKKGGG RVRGGHGGHG PKGSSKSVEH EGRKGILWTE DEHRLFLLGL EKYGKGDWRS  60
ISRNFVISRT PTQVASHAQK YFIRLNSMNR ERRRSSIHDI TSVNGEASAA QGPITGTNGQ  120
AAVPGKSPKQ SPHQPGNLPP GVDAFGTTIG QPVGGPLVSA VGTPVTLPVA APPHMGYAMH  180
APVPGTVVPR APMYLMPPPP SR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1410GGKKGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.12e-62MYB family protein