PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG086020.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 50aa    MW: 5857.04 Da    PI: 11.1578
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG086020.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.25.2e-12950753
                      HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
               HLH  7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53
                      e  r+RR++iN +f eL +++P +      K++Ka+iL  +++Y+k+
  TRIDC2BG086020.1  9 EQKRKRREKINRRFIELSTVIPGL-----NKMDKAMILSDTMKYVKQ 50
                      677********************8.....6**************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 50 aa     Download sequence    
LPPLSLAAEQ KRKRREKINR RFIELSTVIP GLNKMDKAMI LSDTMKYVKQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11217RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22750.23e-12bHLH family protein