PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG090580.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 192aa    MW: 21019.8 Da    PI: 9.8371
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG090580.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA40.73.2e-13842135
              GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                      C +Cg   +p WR+gp  ++ LCnaCG ++rkkg+
  TRIDC2BG090580.2  8 CCHCGIMGSPIWRNGPPEKPVLCNACGTRWRKKGT 42
                      99**************88888************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MVKKEGPCCH CGIMGSPIWR NGPPEKPVLC NACGTRWRKK GTLENYTPTR RPQDAEAETK  60
QHKKKPVRRI VKKQPSSDHN LGNTGDTSNP SGFGSAVSYS GSAQSHAREP LVPSRKKSCI  120
GRRRKPSTVE ALAEDLNSIM HQEKLCSGSG VRTIPGSSEE DLLIYHSETP AGSFEIGYGS  180
MLLTHPFKQA SY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47140.11e-37GATA family protein