PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG090580.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 185aa    MW: 20191.7 Da    PI: 9.999
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG090580.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA39.86.4e-13735735
              GATA  7 tkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                      t +p WR+gp  ++ LCnaCG ++rkkg+
  TRIDC2BG090580.3  7 TGSPIWRNGPPEKPVLCNACGTRWRKKGT 35
                      789*******88888************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MVTAADTGSP IWRNGPPEKP VLCNACGTRW RKKGTLENYT PTRRPQDAEA ETKQHKKKPV  60
RRIVKKQPSS DHNLGNTGDT SNPSGFGSAV SYSGSAQSHA REPLVPSRKK SCIGRRRKPS  120
TVEALAEDLN SIMHQEKLCS GSGVRTIPGS SEEDLLIYHS ETPAGSFEIG YGSMLLTHPF  180
KQASY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47140.11e-31GATA family protein