PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG000040.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YB
Protein Properties Length: 202aa    MW: 21793.1 Da    PI: 5.687
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG000040.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB185.44.4e-5824119297
             NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 
                       reqdrflPianvsrimkk+lPanakiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfedyv+plk yl+k+re+e
  TRIDC3AG000040.6  24 REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVDPLKHYLHKFREIE 116
                       89******************************************************************************************* PP

             NF-YB  95 gek 97 
                       ge+
  TRIDC3AG000040.6 117 GER 119
                       *97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MPESDNDSGG PSNTGGEGEL SSPREQDRFL PIANVSRIMK KALPANAKIS KDAKETVQEC  60
VSEFISFITG EASDKCQREK RKTINGDDLL WAMTTLGFED YVDPLKHYLH KFREIEGERA  120
AATSTSTSTT PDMPRNNNNN ATGYADAPGG MMMMGQPMYG SPPPPQQQQQ HQHQIAMGGR  180
AGFPYLGGGG GSSSSSGFGR KE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.12e-69NF-YB family protein