PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG000180.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 168aa    MW: 18077.2 Da    PI: 6.001
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG000180.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.22.2e-114089255
                      HHHHHHH.HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  2 rrahner.ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                      r+++n++ Er RR+r+N+++  +r ++P+      +K++Ka+i + Av YI +Lq
  TRIDC3AG000180.1 40 RASKNIVeERDRRRRLNEKLYAIRGVVPNI-----TKMDKASIIQDAVAYIEELQ 89
                      55556552799******************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MSLADCCSSY LPAEDSLSGL DSCYNDSTGS PSTASTRATR ASKNIVEERD RRRRLNEKLY  60
AIRGVVPNIT KMDKASIIQD AVAYIEELQE QERRILAEVS DLEAGGCTAV VVKSEASTGS  120
EGVEDAGVGF SPPKKTRRTA SSSSINDPVT SPATHPVLLE VKIARRRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.32e-26bHLH family protein