PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG002260.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 274aa    MW: 29050.5 Da    PI: 5.7355
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG002260.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.42.9e-09192235755
                       HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       ++ + RR+ri +++  L++l+P+      +K++ +++LekA+ Y+k Lq
  TRIDC3AG002260.1 192 AVAKVRRERISERLKVLQDLVPNG-----TKVDMVTMLEKAITYVKFLQ 235
                       56799*****************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MACKRATTRE LRAMYDDEPS SMSLELFGYH GVVVDGDDEE GDTATALPQL SFVDNFKGGC  60
GSAAADYYSW AYNASGGTPG ASSSSTSSVL SFEHAGGAGH QLACNSSTGD DDCALWMDTM  120
ADQHGAAKFG FMNPGSADVV PEIQESSIKQ PAKSAQKRSS SGGEAQAAVK KQCGGGRKSK  180
AKVVPTKDPQ SAVAKVRRER ISERLKVLQD LVPNGTKVDM VTMLEKAITY VKFLQLQVKV  240
LATDEFWPVQ GGKAPELSQV KTALDAILSS QQQP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66470.12e-50bHLH family protein