PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG002990.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 208aa MW: 22303.3 Da PI: 10.2524

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG002990.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	22.8	1.7e-07	23	89	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC..................TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkas...............kapskKlsKaeiLekAveYIksLq 55 + +E++RR +++ +L +llP++s + ++ + + L A YIk+L+ TRIDC3AG002990.1 23 ERKDVEKNRRLHMKGLCLKLSSLLPPSSahhlrhysstsssppSSNKDAATQLDQLDSAAAYIKQLR 89 56899*******************888********96666666**************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 208 aa Download sequence
TSTMKGRRQS MVPDGGCSGS KMERKDVEKN RRLHMKGLCL KLSSLLPPSS AHHLRHYSST 60 SSSPPSSNKD AATQLDQLDS AAAYIKQLRG RIDHLKRRKQ AALSGGTAGC SSSVSAGDYK 120 SQTASLPVIE VRHQDGTLDV ALASESGRPF RLHEVIAVLE QEGAEVVSAS FSVVGDKIFY 180 TVHSQAMCPR IGLEPGRVAH RLRGLAAA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10585.1	1e-20	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG002990.1