PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG003030.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HD-ZIP

Protein Properties

Length: 225aa MW: 24742.2 Da PI: 8.9793

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG003030.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.4	2.8e-19	83	137	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tk+q+ Le++F++++++s+++++ LA++l+L rqV vWFqNrRa+ k TRIDC3AG003030.2 83 RKKLRLTKDQTALLEDHFKEQSTLSHKQKASLARQLSLRPRQVEVWFQNRRARTK 137 78889************************************************98 PP
2	HD-ZIP_I/II	118.7	3.1e-38	83	171	1	90
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk+rl+k+q +lLE++F+e+++L++++K++lar+L l+prqv+vWFqnrRARtk+kq+E+d+e Lkr++++l+een+rL++e ++Lr + TRIDC3AG003030.2 83 RKKLRLTKDQTALLEDHFKEQSTLSHKQKASLARQLSLRPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLMEENRRLHRELQHLR-A 171 69*************************************************************************************9.4 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MFMAHEEAGL ALGLSLGSGA GHHHHLLQPK EAAPPEPCLS LRLAGAGTVK REEEERALIY 60 CSAASSAADD LVEGYNSGGG GSRKKLRLTK DQTALLEDHF KEQSTLSHKQ KASLARQLSL 120 RPRQVEVWFQ NRRARTKLKQ TEVDCELLKR CCETLMEENR RLHRELQHLR ALHHHQHHHP 180 AAAFFIPSAA TVASVCPSCS GAPPAHAADR PATKRTFFAT KSAAC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	82	88	SRKKLRL
2	132	140	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	2e-42	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG003030.2