PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG006200.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 144aa    MW: 15659.4 Da    PI: 7.5962
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG006200.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B389.42.8e-28187785
                      .-HHHHTT-EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                B3  7 psdvlksgrlvlpkkfaeeh........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85
                      psdv+k++rlv+pk++ae+h         g++ +++ l +ed +g++W+++++y+++s++yvltkGW++Fvk+ gL++gD+v F+++
  TRIDC3AG006200.3  1 PSDVGKLNRLVVPKQHAEKHfppttaaaTGSNCKGVLLNFEDGEGKVWRFRYSYWNSSQSYVLTKGWSRFVKETGLRAGDTVAFYRS 87
                      79******************9999999844446899*************************************************54 PP
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    
PSDVGKLNRL VVPKQHAEKH FPPTTAAATG SNCKGVLLNF EDGEGKVWRF RYSYWNSSQS  60
YVLTKGWSRF VKETGLRAGD TVAFYRSAYG NDTEDQLFID YKKMNKNDDA ADAAISNENE  120
TGHVAVKLFG VDIAGGGMVG SSGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68840.28e-48RAV family protein