PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG006220.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 213aa    MW: 23639.8 Da    PI: 10.3061
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG006220.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B396.41.9e-3036131187
                       EEEE-..-HHHHTT-EE--HHH.HTT.........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 
                       f+k+ tpsdv+k++rlv+pk++ae+h            + +++ l +ed +g++W+++++y+++s++yvltkGW++Fv+++gL +gD++vF+ 
  TRIDC3AG006220.2  36 FEKAVTPSDVGKLNRLVVPKQHAEKHfplkrtpetTTTTGKGVLLNFEDGEGKVWRFRYSYWNSSQSYVLTKGWSRFVREKGLGAGDSIVFSC 128
                       89*************************9987776644455999************************************************96 PP

                       -SS CS
                B3  85 dgr 87 
                       +  
  TRIDC3AG006220.2 129 SAY 131
                       543 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
LRKHTYADEL RQGLRRGRGM GARAQPTPSW AREPLFEKAV TPSDVGKLNR LVVPKQHAEK  60
HFPLKRTPET TTTTGKGVLL NFEDGEGKVW RFRYSYWNSS QSYVLTKGWS RFVREKGLGA  120
GDSIVFSCSA YGQEKQFFID CKKNKTMASC PADGGAATAS PPVAEAANGE QVRVVRLFGV  180
DIAGEKRGRV AQAEQELFKR QCVAHSQHSP ALE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68840.22e-52RAV family protein