PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG006220.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 187aa    MW: 20550.3 Da    PI: 9.8914
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG006220.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B396.91.3e-306101187
                       EEEE-..-HHHHTT-EE--HHH.HTT.........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 
                       f+k+ tpsdv+k++rlv+pk++ae+h            + +++ l +ed +g++W+++++y+++s++yvltkGW++Fv+++gL +gD++vF+ 
  TRIDC3AG006220.3   6 FEKAVTPSDVGKLNRLVVPKQHAEKHfplkrtpetTTTTGKGVLLNFEDGEGKVWRFRYSYWNSSQSYVLTKGWSRFVREKGLGAGDSIVFSC 98 
                       89*************************9987776644455999************************************************96 PP

                       -SS CS
                B3  85 dgr 87 
                       +  
  TRIDC3AG006220.3  99 SAY 101
                       543 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
AREPLFEKAV TPSDVGKLNR LVVPKQHAEK HFPLKRTPET TTTTGKGVLL NFEDGEGKVW  60
RFRYSYWNSS QSYVLTKGWS RFVREKGLGA GDSIVFSCSA YGQEKQFFID CKKNKTMASC  120
PADGGAATAS PPVAEAANGE QVRVVRLFGV DIAGEKRGRV AQAEQELFKR QCVAHSQHSP  180
ALGAFVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68840.22e-52RAV family protein