PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG006290.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 190aa    MW: 21156.1 Da    PI: 10.0606
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG006290.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B395.34.2e-3011106187
                       EEEE-..-HHHHTT-EE--HHH.HTT.........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 
                       f+k+ tpsdv+k++rlv+pk++ae+h            + +++ l +ed +g++W+++++y+++s++yvltkGW++Fv++++L +gD++vF+ 
  TRIDC3AG006290.2  11 FEKAVTPSDVGKLNRLVVPKQHAEKHfplkrtpetTTTTGNGVLLNFEDGEGKVWRFRYSYWNSSQSYVLTKGWSRFVREKDLAAGDSIVFSC 103
                       89*************************99877766444458999***********************************************96 PP

                       -SS CS
                B3  85 dgr 87 
                       +  
  TRIDC3AG006290.2 104 SAY 106
                       543 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
PTPSWAREPL FEKAVTPSDV GKLNRLVVPK QHAEKHFPLK RTPETTTTTG NGVLLNFEDG  60
EGKVWRFRYS YWNSSQSYVL TKGWSRFVRE KDLAAGDSIV FSCSAYGQEK QFFIDCKKNT  120
TVDGGKSASP LPVVETVKGE QVRVVRLFGV DIAGVKRVRA AMAEQGPPEL FQRQCVTHGR  180
HSPALGSFVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68840.21e-53RAV family protein