PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG006730.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 275aa    MW: 29402.3 Da    PI: 7.2885
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG006730.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.73.1e-11107149754
                       HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
               HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                       ++ErrRR+r+N++++ Lr+ +Pk +      K++  ++L  +++Y+k+L
  TRIDC3AG006730.1 107 MAERRRRKRLNDRLSMLRSTVPKiS------KMDRTATLGDTIDYVKEL 149
                       89*********************66......****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
SGPFQQPMLP SPPAVRPHPH QEFNFNYLSE VCNPWRSCIP DPPAVVQAAA GKAPLTLPLH  60
DAIASSSTFV FGGGAGESSG MRSMPASGTH PESKLNAGSG TPSKNLMAER RRRKRLNDRL  120
SMLRSTVPKI SKMDRTATLG DTIDYVKELT ERIKTVEEEM GTTPEELNLL KNFSSGGNEG  180
TPTRSSTKLC ANVENQGGGD TKIEICCSTN PGALIATVTA LDVLGLEIEQ CVVSCFSDFA  240
MQASCSQAEG KRQVISTDEI KQALLRSAGY GARCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1109116ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10570.17e-56bHLH family protein