PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG008680.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WOX

Protein Properties

Length: 193aa MW: 20734.9 Da PI: 8.9891

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG008680.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	47.9	2.3e-15	27	87	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+++++eq+ +Le+ F++ +p ++e +++ l + +++V++WFqNrR + ++ TRIDC3AG008680.2 27 RSRWAPKPEQILILESIFNSgMVNPAKDETARIRLLLerfgAVRDANVFYWFQNRRSRSRR 87 89***************99***********************************997 PP
2	Wus_type_Homeobox	105.2	4.3e-34	26	88	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +r+RW+P+peQi iLe++++sG+++P+k+e+ ri+ Le++G+++d+NVfyWFQNr++R+r++ TRIDC3AG008680.2 26 TRSRWAPKPEQILILESIFNSGMVNPAKDETARIRLLLERFGAVRDANVFYWFQNRRSRSRRR 88 689**********************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence
MDQHHHGQAP AHGGGRSSEG GEPTTTRSRW APKPEQILIL ESIFNSGMVN PAKDETARIR 60 LLLERFGAVR DANVFYWFQN RRSRSRRRAR KLQQSCGGTG DADQLPSNAA AGHGYHGIGT 120 SPYNTMQYGQ LGGGVSAAAA AVNTAPRFLV DDAEGGDDLF AIPRQMGLMA RGGENQYGYP 180 ATDASQLSYQ ATG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17810.1	2e-29	WOX family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG008680.2